Escherichia coli
562
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
taxon
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
aMAZESpecificCompound0000000638
aMAZE
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
R01786
KEGG
SMILES
C1(C(O)C(O)C(O)C(O1)CO)(O)
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
C05345
KEGG
1.0
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
<FONT FACE="Symbol">a</FONT>-D-glucose
C00267
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
KEGG
a-D-glu
KEGG
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
aMAZE
aMAZESpecificCompound0000000263
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
see http://www.amaze.ulb.ac.be/
aMAZE
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
C6H12O6
180.16
alpha-D-glucose
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
Gene Ontology
GO:0005737
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
cytoplasm
P46880
Swiss-Prot/TrEMBL
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
Adenosine 5'-diphosphate
adenosine diphosphate
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
aMAZE
aMAZESpecificCompound0000000008
427.2
ADP
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
c12(n(cnc(c(N)ncn1)2)[CH]3(O[CH]([CH](O)[CH](O)3)COP(=O)(O)OP(O)(=O)O))
SMILES
C10H15N5O10P2
KEGG
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
C00008
see http://www.amaze.ulb.ac.be/
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
aMAZESpecificCompound0000004507
aMAZE
1.0
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
a-D-glu-6-p
C6H13O9P
<FONT FACE="Symbol">a</FONT>-D-glucose-6-phoshate
C00668
KEGG
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
260.14
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
see http://www.amaze.ulb.ac.be/
glucose-6-P
alpha-D-glucose-6-p
SMILES
C(OP(=O)(O)O)[CH]1([CH](O)[CH](O)[CH](O)[CH](O)O1)
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
alpha-D-glucose 6-phosphate
alpha-D-glucose-6-phosphate
D-glucose-6-P
0.4
alpha-D-Glucose 6-phosphate <=> beta-D-Fructose 6-phosphate
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
C6H13O9P
<FONT FACE="Symbol">b</FONT>-D-fructose-6-phosphate
b-D-fru-6-p
C(OP(O)(O)=O)[CH]1([CH](O)[CH](O)C(O)(O1)CO)
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
SMILES
260.14
beta-D-fructose 6-phosphate
beta-D-fructose-6-phosphate
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
see http://www.amaze.ulb.ac.be/
1.0
a-D-glu-6-p <=> b-D-fru-6-p
Note: If filled, the value of the PARTICIPANTS slot should be the union of the LEFT and RIGHT slots.
see http://www.amaze.ulb.ac.be/
5.3.1.9
R02740
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
KEGG
alpha-D-glu-6-p <=> beta-D-fru-6-p
alpha-D-Glucose 6-phosphate ketol-isomerase
aMAZE
aMAZEReaction0000002504
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
1.0
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
see http://www.amaze.ulb.ac.be/
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
aMAZESpecificCompound0000000002
aMAZE
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
[CH]3(n1(c2(c(nc1)c(N)ncn2)))(O[CH]([CH](O)[CH](O)3)COP(=O)(O)OP(O)(=O)OP(O)(=O)O)
SMILES
507.18
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
C10H16N5O13P3
adenosine triphosphate
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
KEGG
C00002
ATP
Adenosine 5'-triphosphate
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
aMAZEReaction0000001619
aMAZE
The source of this data did not store catalyses of reactions as separate objects, so there are no unification x-refs pointing to the source of these BioPAX instances.
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
PHYSIOL-LEFT-TO-RIGHT
see http://www.amaze.ulb.ac.be/
GLK
Swiss-Prot/TrEMBL
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL
see http://www.amaze.ulb.ac.be/
Glucose kinase
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
GLK_ECOLI
glucokinase
1.0
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
Note: The PARTICIPANTS slot may be left empty if both the CONTROLLED and CONTROLLER slots are filled.
GLK -> (a-D-glu <=> a-D-glu-6-p)
catalysis of (alpha-D-glu <=> alpha-D-glu-6-p)
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
ATP:D-glucose 6-phosphotransferase
alpha-D-glu + ATP <=> alpha-D-glu-6-p + ADP
2.7.1.2
1.0
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
see http://www.amaze.ulb.ac.be/
Note: The PARTICIPANTS slot may be left empty if both the LEFT and RIGHT slots are filled.
glucose ATP phosphotransferase
a-D-glu <=> a-D-glu-6-p
2.7.1.1
aMAZEProcess0000000027
aMAZE
This is the source of this data.
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
The source of this data did not store catalyses of reactions as separate objects, so there are no unification x-refs pointing to the source of these BioPAX instances.
PHYSIOL-LEFT-TO-RIGHT
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
1.0
PHI
Q9KH85
Swiss-Prot/TrEMBL
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
PGI
GPI
see http://www.amaze.ulb.ac.be/
aMAZEPolypeptide0000050740
aMAZE
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
Phosphohexose isomerase
phosphoglucose isomerase
KTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTNAHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSAIGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKMVPCDFIAPAITHNPLFDHHQKLLSKFFAQTEALAFGKSREVVEQEYRDQGKDPAT
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
Glucose-6-phosphate isomerase
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
PGI -> (a-D-glu-6-p <=> b-D-fru-6-p)
catalysis of (alpha-D-glu-6-p <=> beta-D-fru-6-p)
Note: If filled, the value of the PARTICIPANTS slot should be the union of the CONTROLLED and CONTROLLER slots.
see http://www.amaze.ulb.ac.be/
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
glucose degradation
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
PubMed
2549346
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
This example is meant to provide an illustration of how various BioPAX slots should be filled; it is not intended to provide useful (or even accurate) biological information
Embden-Meyerhof pathway
Glycolysis Pathway
glycolysis
see http://www.amaze.ulb.ac.be/