org.biopax.paxtools.controller
Class ConversionScore

java.lang.Object
  org.biopax.paxtools.controller.ConversionScore

All Implemented Interfaces:

java.lang.Comparable

public class ConversionScore
extends java.lang.Object
implements java.lang.Comparable

Encapsulation of scores of conversions, and related information

Constructor Summary

ConversionScore(conversion conv1, conversion conv2, java.lang.Double score, java.util.Map<physicalEntityParticipant,physicalEntityParticipant> pepMap, boolean reverseMatch)

Method Summary

int	compareTo(java.lang.Object obj)
conversion	getConversion1()
conversion	getConversion2()
physicalEntityParticipant	getMatch(physicalEntityParticipant pep1)
java.util.Set<physicalEntityParticipant>	getMatchedPEPs()
java.lang.Double	getScore()
boolean	isReverseMatch()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ConversionScore

public ConversionScore(conversion conv1,
                       conversion conv2,
                       java.lang.Double score,
                       java.util.Map<physicalEntityParticipant,physicalEntityParticipant> pepMap,
                       boolean reverseMatch)

Method Detail

getScore

public java.lang.Double getScore()

getConversion1

public conversion getConversion1()

getConversion2

public conversion getConversion2()

isReverseMatch

public boolean isReverseMatch()

getMatch

public physicalEntityParticipant getMatch(physicalEntityParticipant pep1)

getMatchedPEPs

public java.util.Set<physicalEntityParticipant> getMatchedPEPs()

compareTo

public int compareTo(java.lang.Object obj)

Specified by:

compareTo in interface java.lang.Comparable