Uses of Package
org.biopax.paxtools.controller

Packages that use org.biopax.paxtools.controller

org.biopax.paxtools.command
org.biopax.paxtools.controller
org.biopax.paxtools.io

Classes in org.biopax.paxtools.controller used by org.biopax.paxtools.command

PropertyEditor
This is the base class for all property editors.

Classes in org.biopax.paxtools.controller used by org.biopax.paxtools.controller

AbstractTraverser
This is a convenience all-in-one Traverser/Visitor that keeps track in the model and prevents infinite loops.

ConversionScore
Encapsulation of scores of conversions, and related information

DecoratingPropertyAccessor

EditorMap
This class contains methods that eases to use editors for specific or a set of property.

ModelUtils.RelationshipType
Controlled vocabulary terms for the RelationshipType CV to be added with auto-generated/inferred comments and/or relationship xrefs.

ObjectPropertyEditor
Provides an editor compatible with all value types other Primitive, ENUM, and String by extending the PropertyEditor.

PropertyAccessor
Allows generic access to the properties or a path of properties from a bean.

PropertyEditor
This is the base class for all property editors.

PropertyFilterBilinked

SimpleEditorMap
Provides a simple editor map for a level with a given factory.

SimplePropertyAccessor

TransitivePropertyAccessor
This class is a transitive decorator for PropertyAccessors

Traverser
This is a utility class for traversing over the dependent objects of a biopax element, based on property editors

TraverserBilinked

Visitor
Basic visitor interface for classes using Traverser.

Classes in org.biopax.paxtools.controller used by org.biopax.paxtools.io

EditorMap
This class contains methods that eases to use editors for specific or a set of property.

PropertyEditor
This is the base class for all property editors.

ReusedPEPHelper
This class contains methods for handling reused PEPs.