Hierarchy For Package org.biopax.paxtools.impl.level3

Package Hierarchies:

All Packages

Class Hierarchy

• java.lang.Object
  • org.biopax.paxtools.impl.BioPAXElementImpl (implements org.biopax.paxtools.model.BioPAXElement)
    • org.biopax.paxtools.impl.level3.L3ElementImpl (implements org.biopax.paxtools.model.level3.Level3Element)
      • org.biopax.paxtools.impl.level3.ChemicalStructureImpl (implements org.biopax.paxtools.model.level3.ChemicalStructure)
      • org.biopax.paxtools.impl.level3.DeltaGImpl (implements org.biopax.paxtools.model.level3.DeltaG)
      • org.biopax.paxtools.impl.level3.EntityFeatureImpl (implements org.biopax.paxtools.model.level3.EntityFeature)
        • org.biopax.paxtools.impl.level3.BindingFeatureImpl (implements org.biopax.paxtools.model.level3.BindingFeature)
          • org.biopax.paxtools.impl.level3.CovalentBindingFeatureImpl (implements org.biopax.paxtools.model.level3.CovalentBindingFeature)
        • org.biopax.paxtools.impl.level3.FragmentFeatureImpl (implements org.biopax.paxtools.model.level3.FragmentFeature)
        • org.biopax.paxtools.impl.level3.ModificationFeatureImpl (implements org.biopax.paxtools.model.level3.ModificationFeature)
      • org.biopax.paxtools.impl.level3.ExperimentalFormImpl (implements org.biopax.paxtools.model.level3.ExperimentalForm)
      • org.biopax.paxtools.impl.level3.KPrimeImpl (implements org.biopax.paxtools.model.level3.KPrime)
      • org.biopax.paxtools.impl.level3.PathwayStepImpl (implements org.biopax.paxtools.model.level3.PathwayStep)
        • org.biopax.paxtools.impl.level3.BiochemicalPathwayStepImpl (implements org.biopax.paxtools.model.level3.BiochemicalPathwayStep)
      • org.biopax.paxtools.impl.level3.SequenceLocationImpl (implements org.biopax.paxtools.model.level3.SequenceLocation)
        • org.biopax.paxtools.impl.level3.SequenceIntervalImpl (implements org.biopax.paxtools.model.level3.SequenceInterval)
        • org.biopax.paxtools.impl.level3.SequenceSiteImpl (implements org.biopax.paxtools.model.level3.SequenceSite)
      • org.biopax.paxtools.impl.level3.StoichiometryImpl (implements org.biopax.paxtools.model.level3.Stoichiometry)
      • org.biopax.paxtools.impl.level3.XReferrableImpl (implements org.biopax.paxtools.model.level3.XReferrable)
        • org.biopax.paxtools.impl.level3.ControlledVocabularyImpl (implements org.biopax.paxtools.model.level3.ControlledVocabulary)
          • org.biopax.paxtools.impl.level3.CellularLocationVocabularyImpl (implements org.biopax.paxtools.model.level3.CellularLocationVocabulary)
          • org.biopax.paxtools.impl.level3.CellVocabularyImpl (implements org.biopax.paxtools.model.level3.CellVocabulary)
          • org.biopax.paxtools.impl.level3.EntityReferenceTypeVocabularyImpl (implements org.biopax.paxtools.model.level3.EntityReferenceTypeVocabulary)
          • org.biopax.paxtools.impl.level3.EvidenceCodeVocabularyImpl (implements org.biopax.paxtools.model.level3.EvidenceCodeVocabulary)
          • org.biopax.paxtools.impl.level3.ExperimentalFormVocabularyImpl (implements org.biopax.paxtools.model.level3.ExperimentalFormVocabulary)
          • org.biopax.paxtools.impl.level3.InteractionVocabularyImpl (implements org.biopax.paxtools.model.level3.InteractionVocabulary)
          • org.biopax.paxtools.impl.level3.PhenotypeVocabularyImpl (implements org.biopax.paxtools.model.level3.PhenotypeVocabulary)
          • org.biopax.paxtools.impl.level3.RelationshipTypeVocabularyImpl (implements org.biopax.paxtools.model.level3.RelationshipTypeVocabulary)
          • org.biopax.paxtools.impl.level3.SequenceModificationVocabularyImpl (implements org.biopax.paxtools.model.level3.SequenceModificationVocabulary)
          • org.biopax.paxtools.impl.level3.SequenceRegionVocabularyImpl (implements org.biopax.paxtools.model.level3.SequenceRegionVocabulary)
          • org.biopax.paxtools.impl.level3.TissueVocabularyImpl (implements org.biopax.paxtools.model.level3.TissueVocabulary)
        • org.biopax.paxtools.impl.level3.EvidenceImpl (implements org.biopax.paxtools.model.level3.Evidence)
        • org.biopax.paxtools.impl.level3.NamedImpl
          • org.biopax.paxtools.impl.level3.BioSourceImpl (implements org.biopax.paxtools.model.level3.BioSource)
          • org.biopax.paxtools.impl.level3.EntityImpl (implements org.biopax.paxtools.model.level3.Entity)
            • org.biopax.paxtools.impl.level3.GeneImpl (implements org.biopax.paxtools.model.level3.Gene)
            • org.biopax.paxtools.impl.level3.PhysicalEntityImpl (implements org.biopax.paxtools.model.level3.PhysicalEntity)
              • org.biopax.paxtools.impl.level3.ComplexImpl (implements org.biopax.paxtools.model.level3.Complex)
              • org.biopax.paxtools.impl.level3.SimplePhysicalEntityImpl (implements org.biopax.paxtools.model.level3.SimplePhysicalEntity)
                • org.biopax.paxtools.impl.level3.NucleicAcidImpl (implements org.biopax.paxtools.model.level3.NucleicAcid)
                  • org.biopax.paxtools.impl.level3.DnaImpl (implements org.biopax.paxtools.model.level3.Dna)
                  • org.biopax.paxtools.impl.level3.DnaRegionImpl (implements org.biopax.paxtools.model.level3.DnaRegion)
                  • org.biopax.paxtools.impl.level3.RnaImpl (implements org.biopax.paxtools.model.level3.Rna)
                  • org.biopax.paxtools.impl.level3.RnaRegionImpl (implements org.biopax.paxtools.model.level3.RnaRegion)
                • org.biopax.paxtools.impl.level3.ProteinImpl (implements org.biopax.paxtools.model.level3.Protein)
                • org.biopax.paxtools.impl.level3.SmallMoleculeImpl (implements org.biopax.paxtools.model.level3.SmallMolecule)
            • org.biopax.paxtools.impl.level3.ProcessImpl (implements org.biopax.paxtools.model.level3.Process)
              • org.biopax.paxtools.impl.level3.InteractionImpl (implements org.biopax.paxtools.model.level3.Interaction)
                • org.biopax.paxtools.impl.level3.ControlImpl (implements org.biopax.paxtools.model.level3.Control)
                  • org.biopax.paxtools.impl.level3.CatalysisImpl (implements org.biopax.paxtools.model.level3.Catalysis)
                  • org.biopax.paxtools.impl.level3.ModulationImpl (implements org.biopax.paxtools.model.level3.Modulation)
                  • org.biopax.paxtools.impl.level3.TemplateReactionRegulationImpl (implements org.biopax.paxtools.model.level3.TemplateReactionRegulation)
                • org.biopax.paxtools.impl.level3.ConversionImpl (implements org.biopax.paxtools.model.level3.Conversion)
                  • org.biopax.paxtools.impl.level3.BiochemicalReactionImpl (implements org.biopax.paxtools.model.level3.BiochemicalReaction)
                    • org.biopax.paxtools.impl.level3.TransportWithBiochemicalReactionImpl (implements org.biopax.paxtools.model.level3.TransportWithBiochemicalReaction)
                  • org.biopax.paxtools.impl.level3.ComplexAssemblyImpl (implements org.biopax.paxtools.model.level3.ComplexAssembly)
                  • org.biopax.paxtools.impl.level3.DegradationImpl (implements org.biopax.paxtools.model.level3.Degradation)
                  • org.biopax.paxtools.impl.level3.TransportImpl (implements org.biopax.paxtools.model.level3.Transport)
                • org.biopax.paxtools.impl.level3.GeneticInteractionImpl (implements org.biopax.paxtools.model.level3.GeneticInteraction)
                • org.biopax.paxtools.impl.level3.MolecularInteractionImpl (implements org.biopax.paxtools.model.level3.MolecularInteraction)
                • org.biopax.paxtools.impl.level3.TemplateReactionImpl (implements org.biopax.paxtools.model.level3.TemplateReaction)
              • org.biopax.paxtools.impl.level3.PathwayImpl (implements org.biopax.paxtools.model.level3.Pathway)
          • org.biopax.paxtools.impl.level3.EntityReferenceImpl (implements org.biopax.paxtools.model.level3.EntityReference)
            • org.biopax.paxtools.impl.level3.SequenceEntityReferenceImpl (implements org.biopax.paxtools.model.level3.SequenceEntityReference)
              • org.biopax.paxtools.impl.level3.NucleicAcidReferenceImpl (implements org.biopax.paxtools.model.level3.NucleicAcidReference)
                • org.biopax.paxtools.impl.level3.DnaReferenceImpl (implements org.biopax.paxtools.model.level3.DnaReference)
                • org.biopax.paxtools.impl.level3.NucleicAcidRegionReferenceImpl (implements org.biopax.paxtools.model.level3.NucleicAcidRegionReference)
                  • org.biopax.paxtools.impl.level3.DnaRegionReferenceImpl (implements org.biopax.paxtools.model.level3.DnaRegionReference)
                  • org.biopax.paxtools.impl.level3.RnaRegionReferenceImpl (implements org.biopax.paxtools.model.level3.RnaRegionReference)
                • org.biopax.paxtools.impl.level3.RnaReferenceImpl (implements org.biopax.paxtools.model.level3.RnaReference)
              • org.biopax.paxtools.impl.level3.ProteinReferenceImpl (implements org.biopax.paxtools.model.level3.ProteinReference)
            • org.biopax.paxtools.impl.level3.SmallMoleculeReferenceImpl (implements org.biopax.paxtools.model.level3.SmallMoleculeReference)
          • org.biopax.paxtools.impl.level3.ProvenanceImpl (implements org.biopax.paxtools.model.level3.Provenance)
        • org.biopax.paxtools.impl.level3.ScoreImpl (implements org.biopax.paxtools.model.level3.Score)
      • org.biopax.paxtools.impl.level3.XrefImpl (implements org.biopax.paxtools.model.level3.Xref)
        • org.biopax.paxtools.impl.level3.PublicationXrefImpl (implements org.biopax.paxtools.model.level3.PublicationXref)
        • org.biopax.paxtools.impl.level3.RelationshipXrefImpl (implements org.biopax.paxtools.model.level3.RelationshipXref)
        • org.biopax.paxtools.impl.level3.UnificationXrefImpl (implements org.biopax.paxtools.model.level3.UnificationXref)
  • org.biopax.paxtools.model.BioPAXFactory
    • org.biopax.paxtools.impl.BioPAXFactoryAdaptor
      • org.biopax.paxtools.impl.level3.Level3FactoryImpl