Uses of Class
org.biopax.paxtools.model.BioPAXElement.Key

Packages that use BioPAXElement.Key
org.biopax.paxtools.model.level3   
 

Uses of BioPAXElement.Key in org.biopax.paxtools.model.level3
 

Methods in org.biopax.paxtools.model.level3 with annotations of type BioPAXElement.Key
 BindingFeature BindingFeature.getBindsTo()
          A binding feature represents a "half" of the bond between two entities.
 java.util.Set<PhysicalEntity> Catalysis.getCofactor()
          Any cofactor(s) or coenzyme(s) required for catalysis of the conversion by the enzyme.
 java.util.Set<PhysicalEntity> Complex.getComponent()
          Defines the PhysicalEntity subunits of this complex.
 java.util.Set<Stoichiometry> Complex.getComponentStoichiometry()
          The stoichiometry of components in a complex.
 java.lang.Boolean BindingFeature.getIntraMolecular()
          IntraMolecular flag is true iff this binding feature represents a bond within the same molecule, for example a disulfide bond within the same molecule.
 Conversion BiochemicalPathwayStep.getStepConversion()
          This method returns the central conversion of this BiochemicalPathwayStep.
 StepDirection BiochemicalPathwayStep.getStepDirection()
          This property can be used for annotating direction of enzymatic activity.
 java.lang.String ChemicalStructure.getStructureData()
          This property holds a string defining chemical structure,in one of the three formats: CML, SMILES or InChI.
 StructureFormatType ChemicalStructure.getStructureFormat()
          This property specifies which format is used to define chemical structure.
 



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