Uses of Interface
org.biopax.paxtools.model.level2.Level2Element

Packages that use Level2Element

org.biopax.paxtools.model.level2

Uses of Level2Element in org.biopax.paxtools.model.level2

Subinterfaces of Level2Element in org.biopax.paxtools.model.level2

interface	biochemicalReaction A conversion interaction in which one or more entities (substrates) undergo ovalent changes to become one or more other entities (products).
interface	bioSource The biological source of an entity (e.g.
interface	catalysis A control interaction in which a physical entity (a catalyst) increases the rate of a conversion interaction by lowering its activation energy.
interface	chemicalStructure Describes a small molecule structure.
interface	complex A physical entity whose structure is comprised of other physical entities bound to each other non-covalently, at least one of which is a macromolecule (e.g.
interface	complexAssembly A conversion interaction in which a set of physical entities, at least one being a macromolecule (e.g.
interface	confidence Confidence that the containing instance actually occurs or exists in vivo, usually a statistical measure.
interface	control
interface	conversion
interface	dataSource XREF Should be only unification and publication xrefs
interface	deltaGprimeO
interface	dna
interface	entity This class represents a discrete biological unit used when describing pathways.
interface	evidence
interface	experimentalForm
interface	externalReferenceUtilityClass
interface	interaction
interface	InteractionParticipant marker interface for entities and PEPs
interface	kPrime
interface	modulation get controlled should be catalysis
interface	openControlledVocabulary
interface	pathway
interface	pathwayComponent Interface for pathway steps and processes
interface	pathwayStep This represents a set of pathway events.
interface	physicalEntity
interface	physicalEntityParticipant
interface	physicalInteraction
interface	process Tagging interface for entities that needs evidence and can be targeted by a control : Pathway and Interaction
interface	protein
interface	publicationXref
interface	relationshipXref
interface	rna
interface	sequenceEntity User: root Date: Aug 7, 2006 Time: 4:51:19 PM_DOT
interface	sequenceFeature
interface	sequenceInterval
interface	sequenceLocation
interface	sequenceParticipant
interface	sequenceSite
interface	smallMolecule
interface	transport
interface	transportWithBiochemicalReaction
interface	unificationXref
interface	utilityClass
interface	xref
interface	XReferrable