Uses of Interface
org.biopax.paxtools.model.level2.conversion

Packages that use conversion

org.biopax.paxtools.controller
org.biopax.paxtools.model.level2
org.biopax.paxtools.util

Uses of conversion in org.biopax.paxtools.controller

Methods in org.biopax.paxtools.controller that return conversion

conversion	ConversionScore.getConversion1()
conversion	ConversionScore.getConversion2()

Constructors in org.biopax.paxtools.controller with parameters of type conversion

ConversionScore(conversion conv1, conversion conv2, java.lang.Double score, java.util.Map<physicalEntityParticipant,physicalEntityParticipant> pepMap, boolean reverseMatch)

Uses of conversion in org.biopax.paxtools.model.level2

Subinterfaces of conversion in org.biopax.paxtools.model.level2

interface	biochemicalReaction A conversion interaction in which one or more entities (substrates) undergo ovalent changes to become one or more other entities (products).
interface	complexAssembly A conversion interaction in which a set of physical entities, at least one being a macromolecule (e.g.
interface	transport
interface	transportWithBiochemicalReaction

Uses of conversion in org.biopax.paxtools.util

Methods in org.biopax.paxtools.util with parameters of type conversion

static boolean	Level2Helper.hasLeftToRightEvidence(conversion conv, control cont)
static boolean	Level2Helper.hasRightToLeftEvidence(conversion conv, control cont)