Uses of Interface
org.biopax.paxtools.model.level2.interaction

Packages that use interaction

org.biopax.paxtools.model.level2

Uses of interaction in org.biopax.paxtools.model.level2

Subinterfaces of interaction in org.biopax.paxtools.model.level2

interface	biochemicalReaction A conversion interaction in which one or more entities (substrates) undergo ovalent changes to become one or more other entities (products).
interface	catalysis A control interaction in which a physical entity (a catalyst) increases the rate of a conversion interaction by lowering its activation energy.
interface	complexAssembly A conversion interaction in which a set of physical entities, at least one being a macromolecule (e.g.
interface	control
interface	conversion
interface	modulation get controlled should be catalysis
interface	physicalInteraction
interface	transport
interface	transportWithBiochemicalReaction

Methods in org.biopax.paxtools.model.level2 with type parameters of type interaction

<T extends interaction> java.util.Set<T>

physicalEntity.getAllInteractions(java.lang.Class<T> ofType)

Methods in org.biopax.paxtools.model.level2 that return types with arguments of type interaction

java.util.Set<interaction>	physicalEntity.getAllInteractions()
java.util.Set<interaction>	InteractionParticipant.isPARTICIPANTSof() This method returns the interaction that this entity/pep takes part in.