Uses of Interface
org.biopax.paxtools.model.level2.physicalEntity

Packages that use physicalEntity

org.biopax.paxtools.model.level2
org.biopax.paxtools.util

Uses of physicalEntity in org.biopax.paxtools.model.level2

Subinterfaces of physicalEntity in org.biopax.paxtools.model.level2

interface	complex A physical entity whose structure is comprised of other physical entities bound to each other non-covalently, at least one of which is a macromolecule (e.g.
interface	dna
interface	protein
interface	rna
interface	sequenceEntity User: root Date: Aug 7, 2006 Time: 4:51:19 PM_DOT
interface	smallMolecule

Methods in org.biopax.paxtools.model.level2 that return physicalEntity

physicalEntity

physicalEntityParticipant.getPHYSICAL_ENTITY()

Methods in org.biopax.paxtools.model.level2 with parameters of type physicalEntity

void	physicalEntityParticipant.setPHYSICAL_ENTITY(physicalEntity PHYSICAL_ENTITY)

Uses of physicalEntity in org.biopax.paxtools.util

Methods in org.biopax.paxtools.util with parameters of type physicalEntity

static java.util.Collection<java.util.List<physicalEntityParticipant>>

Level2Helper.groupParticipants(physicalEntity pe, boolean includeComplexMemberships)