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| Packages that use process | |
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| org.biopax.paxtools.model.level2 | |
| Uses of process in org.biopax.paxtools.model.level2 |
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| Subinterfaces of process in org.biopax.paxtools.model.level2 | |
|---|---|
interface |
biochemicalReaction
A conversion interaction in which one or more entities (substrates) undergo ovalent changes to become one or more other entities (products). |
interface |
catalysis
A control interaction in which a physical entity (a catalyst) increases the rate of a conversion interaction by lowering its activation energy. |
interface |
complexAssembly
A conversion interaction in which a set of physical entities, at least one being a macromolecule (e.g. |
interface |
control
|
interface |
conversion
|
interface |
interaction
|
interface |
modulation
get controlled should be catalysis |
interface |
pathway
|
interface |
physicalInteraction
|
interface |
transport
|
interface |
transportWithBiochemicalReaction
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| Methods in org.biopax.paxtools.model.level2 that return types with arguments of type process | |
|---|---|
java.util.Set<process> |
control.getCONTROLLED()
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java.util.Set<process> |
pathwayStep.getSTEP_INTERACTIONS()
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| Methods in org.biopax.paxtools.model.level2 with parameters of type process | |
|---|---|
void |
control.addCONTROLLED(process CONTROLLED)
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void |
pathwayStep.addSTEP_INTERACTIONS(process processStep)
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void |
control.removeCONTROLLED(process CONTROLLED)
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void |
pathwayStep.removeSTEP_INTERACTIONS(process processStep)
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| Method parameters in org.biopax.paxtools.model.level2 with type arguments of type process | |
|---|---|
void |
control.setCONTROLLED(java.util.Set<process> CONTROLLED)
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void |
pathwayStep.setSTEP_INTERACTIONS(java.util.Set<process> STEP_INTERACTIONS)
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