org.biopax.paxtools.model.level2
Interface sequenceFeature

All Superinterfaces:

BioPAXElement, java.lang.Cloneable, Level2Element, java.io.Serializable, utilityClass, XReferrable

public interface sequenceFeature
extends utilityClass, XReferrable

Nested Class Summary

Nested classes/interfaces inherited from interface org.biopax.paxtools.model.BioPAXElement

BioPAXElement.Key

Field Summary

Fields inherited from interface org.biopax.paxtools.model.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Method Summary

void	addFEATURE_LOCATION(sequenceLocation FEATURE_LOCATION)
void	addSYNONYMS(java.lang.String SYNONYMS)
java.util.Set<sequenceLocation>	getFEATURE_LOCATION()
openControlledVocabulary	getFEATURE_TYPE()
java.lang.String	getNAME()
java.lang.String	getSHORT_NAME()
java.util.Set<java.lang.String>	getSYNONYMS()
void	removeFEATURE_LOCATION(sequenceLocation FEATURE_LOCATION)
void	removeSYNONYMS(java.lang.String SYNONYMS)
void	setFEATURE_LOCATION(java.util.Set<sequenceLocation> FEATURE_LOCATION)
void	setFEATURE_TYPE(openControlledVocabulary FEATURE_TYPE)
void	setNAME(java.lang.String NAME)
void	setSHORT_NAME(java.lang.String SHORT_NAME)
void	setSYNONYMS(java.util.Set<java.lang.String> SYNONYMS)

Methods inherited from interface org.biopax.paxtools.model.level2.XReferrable

addXREF, findCommonPublications, findCommonRelationships, findCommonUnifications, getXREF, removeXREF, setXREF

Methods inherited from interface org.biopax.paxtools.model.level2.Level2Element

addCOMMENT, getCOMMENT, removeCOMMENT, setCOMMENT

Methods inherited from interface org.biopax.paxtools.model.BioPAXElement

equivalenceCode, getAnnotations, getModelInterface, getRDFId, isEquivalent

Method Detail

addFEATURE_LOCATION

void addFEATURE_LOCATION(sequenceLocation FEATURE_LOCATION)

addSYNONYMS

void addSYNONYMS(java.lang.String SYNONYMS)

getFEATURE_LOCATION

java.util.Set<sequenceLocation> getFEATURE_LOCATION()

getFEATURE_TYPE

openControlledVocabulary getFEATURE_TYPE()

getNAME

java.lang.String getNAME()

getSHORT_NAME

java.lang.String getSHORT_NAME()

getSYNONYMS

java.util.Set<java.lang.String> getSYNONYMS()

removeFEATURE_LOCATION

void removeFEATURE_LOCATION(sequenceLocation FEATURE_LOCATION)

removeSYNONYMS

void removeSYNONYMS(java.lang.String SYNONYMS)

setFEATURE_LOCATION

void setFEATURE_LOCATION(java.util.Set<sequenceLocation> FEATURE_LOCATION)

setFEATURE_TYPE

void setFEATURE_TYPE(openControlledVocabulary FEATURE_TYPE)

setNAME

void setNAME(java.lang.String NAME)

setSHORT_NAME

void setSHORT_NAME(java.lang.String SHORT_NAME)

setSYNONYMS

void setSYNONYMS(java.util.Set<java.lang.String> SYNONYMS)