org.biopax.paxtools.model.level2
Interface smallMolecule

All Superinterfaces:

BioPAXElement, java.lang.Cloneable, entity, InteractionParticipant, Level2Element, physicalEntity, java.io.Serializable, XReferrable

public interface smallMolecule
extends physicalEntity

Nested Class Summary

Nested classes/interfaces inherited from interface org.biopax.paxtools.model.BioPAXElement

BioPAXElement.Key

Field Summary

Fields inherited from interface org.biopax.paxtools.model.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Method Summary

void	addSTRUCTURE(chemicalStructure STRUCTURE)
java.lang.String	getCHEMICAL_FORMULA()
double	getMOLECULAR_WEIGHT()
java.util.Set<chemicalStructure>	getSTRUCTURE()
void	removeSTRUCTURE(chemicalStructure STRUCTURE)
void	setCHEMICAL_FORMULA(java.lang.String CHEMICAL_FORMULA)
void	setMOLECULAR_WEIGHT(double MOLECULAR_WEIGHT)
void	setSTRUCTURE(java.util.Set<chemicalStructure> STRUCTURE)

Methods inherited from interface org.biopax.paxtools.model.level2.physicalEntity

addPHYSICAL_ENTITYof, getAllInteractions, getAllInteractions, isPHYSICAL_ENTITYof, removePHYSICAL_ENTITYof

Methods inherited from interface org.biopax.paxtools.model.level2.entity

addAVAILABILITY, addDATA_SOURCE, addSYNONYMS, getAVAILABILITY, getDATA_SOURCE, getNAME, getSHORT_NAME, getSYNONYMS, removeAVAILABILITY, removeDATA_SOURCE, removeSYNONYMS, setAVAILABILITY, setDATA_SOURCE, setNAME, setSHORT_NAME, setSYNONYMS

Methods inherited from interface org.biopax.paxtools.model.level2.XReferrable

addXREF, findCommonPublications, findCommonRelationships, findCommonUnifications, getXREF, removeXREF, setXREF

Methods inherited from interface org.biopax.paxtools.model.level2.InteractionParticipant

isPARTICIPANTSof

Methods inherited from interface org.biopax.paxtools.model.level2.Level2Element

addCOMMENT, getCOMMENT, removeCOMMENT, setCOMMENT

Methods inherited from interface org.biopax.paxtools.model.BioPAXElement

equivalenceCode, getAnnotations, getModelInterface, getRDFId, isEquivalent

Method Detail

addSTRUCTURE

void addSTRUCTURE(chemicalStructure STRUCTURE)

getCHEMICAL_FORMULA

java.lang.String getCHEMICAL_FORMULA()

getMOLECULAR_WEIGHT

double getMOLECULAR_WEIGHT()

getSTRUCTURE

java.util.Set<chemicalStructure> getSTRUCTURE()

removeSTRUCTURE

void removeSTRUCTURE(chemicalStructure STRUCTURE)

setCHEMICAL_FORMULA

void setCHEMICAL_FORMULA(java.lang.String CHEMICAL_FORMULA)

setMOLECULAR_WEIGHT

void setMOLECULAR_WEIGHT(double MOLECULAR_WEIGHT)

setSTRUCTURE

void setSTRUCTURE(java.util.Set<chemicalStructure> STRUCTURE)