org.biopax.paxtools.model.level3
Interface PathwayStep

All Superinterfaces:

BioPAXElement, java.lang.Cloneable, Level3Element, Observable, java.io.Serializable, UtilityClass

All Known Subinterfaces:

BiochemicalPathwayStep

All Known Implementing Classes:

BiochemicalPathwayStepImpl, PathwayStepImpl

public interface PathwayStep
extends UtilityClass, Observable

This represents a set of pathway events.

Nested Class Summary

Nested classes/interfaces inherited from interface org.biopax.paxtools.model.BioPAXElement

BioPAXElement.Key

Field Summary

Fields inherited from interface org.biopax.paxtools.model.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Method Summary

void	addNextStep(PathwayStep newNEXT_STEP)
void	addStepProcess(Process newSTEP_INTERACTIONS)
java.util.Set<PathwayStep>	getNextStep()
java.util.Set<PathwayStep>	getNextStepOf()
Pathway	getPathwayOrderOf()
java.util.Set<Process>	getStepProcess()
void	removeNextStep(PathwayStep oldNEXT_STEP)
void	removeStepProcess(Process oldSTEP_INTERACTIONS)

Methods inherited from interface org.biopax.paxtools.model.level3.Level3Element

addComment, getComment, removeComment

Methods inherited from interface org.biopax.paxtools.model.BioPAXElement

equivalenceCode, getAnnotations, getModelInterface, getRDFId, isEquivalent

Methods inherited from interface org.biopax.paxtools.model.level3.Observable

addEvidence, getEvidence, removeEvidence

Method Detail

getNextStep

java.util.Set<PathwayStep> getNextStep()

addNextStep

void addNextStep(PathwayStep newNEXT_STEP)

removeNextStep

void removeNextStep(PathwayStep oldNEXT_STEP)

getNextStepOf

java.util.Set<PathwayStep> getNextStepOf()

getStepProcess

java.util.Set<Process> getStepProcess()

addStepProcess

void addStepProcess(Process newSTEP_INTERACTIONS)

removeStepProcess

void removeStepProcess(Process oldSTEP_INTERACTIONS)

getPathwayOrderOf

Pathway getPathwayOrderOf()