Difference between revisions of "Main Page"

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m (Reverted edits by Rodche (Talk) to last revision by Sgtp)
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==Note==
 
==Note==
Many (but not all) BioPAX Wiki Pages Have Been Recently Auto-converted from the MoinMoin to MediaWiki. <br/>
 
The Conversion Was Not Perfect, So We Encourage Everyone to Edit, Starting from the [[FrontPage|Original biopaxwiki Front Page]]
 
or Picking up a [[Special:Random|Random Page]].
 
  
The [http://archive.biopaxwiki.org Original Wiki Archive] is available (readonly).
+
BioPAX wiki pages were auto-converted from the MoinMoin to MediaWiki, and this was not perfect. We encourage everyone to review and fix them, e.g., by simply picking up a [[Special:Random|Random Page]].
 +
 
 +
[http://archive.biopaxwiki.org Original Wiki Archive] is still available (readonly).
  
 
Known Issues:
 
Known Issues:
 
* not all pages were copied, but they are available in the archive (exception: see the next issue)
 
* not all pages were copied, but they are available in the archive (exception: see the next issue)
* after the conversion, a sub-page name became, e.g., "Page/SubPage", but the parent "Page" still refers to it as <nowiki>[[/SubPage]]</nowiki>. Therefore, this has to be changed manually to <nowiki>[[Page/SubPage]]</nowiki>
+
* after the conversion, a sub-page name became, e.g., "Page/SubPage", but the parent "Page" still refers to it as <nowiki>[[/SubPage]]</nowiki>. This has to be changed manually to <nowiki>[[Page/SubPage]]</nowiki>
* attachments were not copied; images can be easily uploaded and linked, but others: PDF, OWL, etc., cannot (there seems to be no simple solution, as the MediaWiki is globally configured, shared application at SourceForge). So, we manually uploaded them to http://sourceforge.net/projects/biopax/files (directory '''/other''')
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* attachments were not copied; images can be easily uploaded and linked, but PDF, OWL, etc., cannot <br/>(there is no simple solution, because the wiki is SourceForge's globally configured and shared application). So, we manually uploaded them to [http://sourceforge.net/projects/biopax/files "/other" directory]
* list items: you may find some pages look ugly due to extra spaces before <nowiki>* or #</nowiki> or broken nested lists (must be <nowiki>*, **, ***, etc. or #, ##, ###,..</nowiki>)
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* you may find some pages look ugly due to extra spaces before <nowiki>* or #</nowiki> or broken nested lists (must be <nowiki>*, **, ***, etc. or #, ##, ###,..</nowiki>)
 
+
  
 
__NOTOC__
 
__NOTOC__

Revision as of 19:28, 9 July 2010

BioPAX : Biological Pathways Exchange

BioPAX is a collaborative effort to create a data exchange format for biological pathway data.


Using BioPAX

Documentation

Community

BioPAX Workgroup Coordination


Note

BioPAX wiki pages were auto-converted from the MoinMoin to MediaWiki, and this was not perfect. We encourage everyone to review and fix them, e.g., by simply picking up a Random Page.

Original Wiki Archive is still available (readonly).

Known Issues:

  • not all pages were copied, but they are available in the archive (exception: see the next issue)
  • after the conversion, a sub-page name became, e.g., "Page/SubPage", but the parent "Page" still refers to it as [[/SubPage]]. This has to be changed manually to [[Page/SubPage]]
  • attachments were not copied; images can be easily uploaded and linked, but PDF, OWL, etc., cannot
    (there is no simple solution, because the wiki is SourceForge's globally configured and shared application). So, we manually uploaded them to "/other" directory
  • you may find some pages look ugly due to extra spaces before * or # or broken nested lists (must be *, **, ***, etc. or #, ##, ###,..)